Distances

In the field of data mining, it is often required to determine which members of a training set are closest to unknown test instances. It is imperative to have a good set of different distance functions for any of the algorithms that perform the search, and SciPy has, for this purpose, a huge collection of optimally coded functions in the distance submodule of the scipy.spatial module. The list is long. Besides Euclidean, squared Euclidean, or standardized Euclidean, we have many more—Bray-Curtis, Canberra, Chebyshev, Manhattan, correlation distance, cosine distance, dice dissimilarity, Hamming, Jaccard-Needham, Kulsinski, Mahalanobis, and so on. The syntax in most cases is simple:

distance_function(first_vector, second_vector)

The only three cases in which the syntax is different are the Minkowski, Mahalanobis, and standardized Euclidean distances, in which the distance function requires either an integer number (for the order of the norm in the definition of Minkowski distance)...